Spectroscopic studies on the interaction of Fe3O4@CaAl LDH@Lamivudine with the calf thymus DNA

Subject Areas : Journal of Nanoanalysis

Nahid Shahabadi ¹ , Mahtab Razlansari ² , Avat (Arman) Taherpour ³

1 - Inorganic Chemistry Department, Faculty of Chemistry, Razi University, Kermanshah, Iran
2 - Inorganic Chemistry Department, Faculty of Chemistry, Razi University, Kermanshah, Iran
3 - Organic Chemistry Department, Faculty of Chemistry, Razi University, Kermanshah, Iran

Received: 2018-04-11 Accepted : 2018-08-11 Published : 2018-10-01

Keywords:

References:

 

[1] I. Haq, Thermodynamics of drug-DNA interactions, Arch. Biochem. Biophys., 403, 1 (2002).

[2] N. Ghinea, M. Little, W. Lipworth, Access to High Cost Cancer Medicines Through the Lens of an Australian Senate Inquiry-Defining the “Goods” at Stake, J. Bioethic. Inq., 14, 401 (2017).

[3] L. Xu, Y.-X. Hu, Y.-C. Li, L. Zhang, H.-X. Ai, Y.-F. Liu, H.-S. Liu, In vitro DNA binding studies of lenalidomide using spectroscopic in combination with molecular docking techniques, J. Mol. Struct., 1154, 9 (2018).

[4] J.B. Mamani, L.F. Gamarra, G.E.d.S. Brito, Synthesis and characterization of Fe₃O₄ nanoparticles with perspectives in biomedical applications, Mater. Res., 17, 542 (2014).

[5] M. Oroujeni, B. Kaboudin, W. Xia, P. Jönsson, D.A. Ossipov, Conjugation of cyclodextrin to magnetic Fe₃O₄ nanoparticles via polydopamine coating for drug delivery, Prog. org. coat., 114, 154 (2018).

[6] G. Choi, T.-H. Kim, J.-M. Oh, J.-H. Choy, Emerging nanomaterials with advanced drug delivery functions; focused on methotrexate delivery, Chem. Rev., 359, 32 (2018).

[7] S. Senapati, R. Shukla, A.K. Mahanta, D. Rana, P. Maiti, Y.B. Tripathi, Engineered Cellular Uptake and Controlled Drug Delivery Using Two Dimensional Nanoparticle and Polymer for Cancer Treatment, Mol. Pharm., (2018).

[8] T.K. Sau, A. Biswas, P. Ray, S. Thota, D.C. Crans, Metal Nanoparticles in Nanomedicine: Advantages and Scope, Metal Nanoparticles: Synthesis, Appl. Pharm. Sci., 155 (2018).

[9] J. Warren Beach, Chemotherapeutic agents for human immunodeficiency virus infection: mechanism of action, pharmacokinetics, metabolism, and adverse reactions, Clinical Therapeutics, 20, 2 (1998).

[10] O. World Health, Consolidated guidelines on the use of antiretroviral drugs for treating and preventing HIV infection: recommendations for a public health approach, W. H. O., 2016.

[11] N. Shahabadi, M. Maghsudi, M. Mahdavi, M. Pourfoulad, Interaction of calf thymus DNA with the antiviral drug lamivudine, DNA cell .biol., 31, 122 (2012).

[12] N. Shahabadi, M. Falsafi, F. Feizi, R. Khodarahmi, Functionalization of γ-Fe₂O₃@SiO₂ nanoparticles using the antiviral drug zidovudine: synthesis, characterization, in vitro cytotoxicity and DNA interaction studies, RSC Adv., 6, 73605 (2016).

[13] N. Shahabadi, M. Razlansari, Exploring the interaction of nanocomposite composed of Fe₃O₄, CaAl layered double hydroxide and lamivudine drug with Human serum albumin (HSA): Spectroscopic studies, J. Nanoanalysis, 5, 107 (2018).

[14] A. Özel, B. Barut, Ü. Demirbaş, Z. Biyiklioglu, Investigation of DNA binding, DNA photocleavage, topoisomerase I inhibition and antioxidant activities of water soluble titanium (IV) phthalocyanine compounds, J. Photochem. Photobiol. B: Biology., 157, 32 (2016).

[15] D. Lazić, A. Arsenijević, R. Puchta, Ž.D. Bugarčić, A. Rilak, DNA binding properties, histidine interaction and cytotoxicity studies of water soluble ruthenium (II) terpyridine complexes, Dalton Trans., 45, 4633 (2016).

[16] N. Shahabadi, A. Khorshidi, H. Zhaleh, S. Kashanian, Synthesis, characterization, cytotoxicity and DNA binding studies of Fe₃O₄@SiO₂ nanoparticles coated by an antiviral drug lamivudine, J. Drug. Deliv. Sci. Technol., 46, 55 (2018).

[17] M. Aghazadeh, One-step cathodic electrosynthesis of surface capped Fe₃O₄ ultra-fine nanoparticles from ethanol medium without using coating agent, Mater. Lett., 211, 225 (2018).

[18] S.J. Kiprono, M.W. Ullah, G. Yang, Encapsulation of E. coli in biomimetic and Fe₃O₄-doped hydrogel: structural and viability analyses, Appl. Microbiol. Biotechnol., 102, 933 (2018).

[19] B. Ma, A. Fernandez-Martinez, S. Grangeon, C. Tournassat, N. Findling, S. Carrero, D. Tisserand, S. Bureau, E. Elkaïm, C. Marini, Selenite uptake by CaAl LDH: a description of intercalated anion coordination geometries, Environ. Sci. Technol., 52, 1624 (2018).

[20] M.P. Bernardo, C. Ribeiro, [Mg-Al]-LDH and [Zn-Al]-LDH as Matrices for Removal of High Loadings of Phosphate, Mater. Res, 21 (2018).

[21] A.K. Jena, A.K. Nayak, A. De, D. Mitra, A. Samanta, Development of lamivudine containing multiple emulsions stabilized by gum odina, J. Pharm. Sci., 4, 71 (2018).

[22] M. Sirajuddin, S. Ali, A. Badshah, Drug-DNA interactions and their study by UV-Visible, fluorescence spectroscopies and cyclic voltametry, J. Photochem. Photobiol., 124, 1 (2013).

[23] M. Parveen, F. Ahmad, A.M. Malla, M.S. Khan, S.U. Rehman, M. Tabish, M.R. Silva, P.S.P. Silva, Structure elucidation and DNA binding specificity of natural compounds from Cassia siamea leaves: A biophysical approach, J. Photochem. Photobiol., 159, 218 (2016).

[24] B.M. Baker, J. Vanderkool, N.R. Kallenbach, Base stacking in a fluorescent dinucleoside monophosphate: εApεA, Biopolymers, 17, 1361 (1978).

[25] M.P. Grant, Synthesis and analysis of platinum (II) sequence selective complexes, (2011).

[26] X. Wen, Q. Wang, Z. Fan, Active fluorescent probe based on aggregation-induced emission for intracellular bioimaging of Zn²⁺ and tracking of interactions with single-stranded DNA, Anal. Chim. Acta., (2018).

[27] M.R. Gill, J.A. Thomas, Targeting cellular DNA with Luminescent Ruthenium (II) Polypyridyl Complexes, Ruthenium Complexes, Photochem. Biomed. Appl., 221 (2017).

[28] L. Cui, M. Lu, Y. Li, B. Tang, C.-y. Zhang, A reusable ratiometric electrochemical biosensor on the basis of the binding of methylene blue to DNA with alternating AT base sequence for sensitive detection of adenosine, Biosens. Bioelectron., 102, 87 (2018).

[29] K.S. Saini, R. Ashraf, D. Mandalapu, S. Das, M.Q. Siddiqui, S. Dwivedi, J. Sarkar, V.L. Sharma, R. Konwar, New orally active DNA minor groove binding small molecule CT‐1 acts against breast cancer by targeting tumor DNA damage leading to p53‐dependent apoptosis, Mol. Carcinog., 56, 1266 (2017).

[30] M. Gholivand, H. Peyman, K. Gholivand, H. Roshanfekr, A.A. Taherpour, R. Yaghobi, Theoretical and Instrumental Studies of the Competitive Interaction Between Aromatic α-Aminobisphosphonates with DNA Using Binding Probes, Appl. biochem. biotechn., 182, 925 (2017).

[31] T. Sarwar, H.M. Ishqi, S.U. Rehman, M.A. Husain, Y. Rahman, M. Tabish, Caffeic acid binds to the minor groove of calf thymus DNA: A multi-spectroscopic, thermodynamics and molecular modelling study, Int. J. Biol Macromol., 98, 319 (2017).

[32] Y. Sha, X. Chen, B. Niu, Q. Chen, The interaction mode of groove binding between quercetin and calf thymus DNA based on spectrometry and simulation, Chem. Biodivers., (2017).

[33] D. İnci, R. Aydın, Ö. Vatan, Y. Zorlu, N. Çinkılıç, New binary copper (II) complexes containing intercalating ligands: DNA interactions, an unusual static quenching mechanism of BSA and cytotoxic activities, J. Biomol. Struct. Dyn., 1 (2017).

[34] A. Usman, M. Ahmad, Binding of Bisphenol-F, a bisphenol analogue, to calf thymus DNA by multi-spectroscopic and molecular docking studies, Chemosphere, 181, 536 (2017).

[35] C.A. Lelis, E.A. Hudson, G.M.D. Ferreira, G.M.D. Ferreira, L.H.M. da Silva, M.d.C.H. da Silva, M.S. Pinto, A.C. dos Santos Pires, Binding thermodynamics of synthetic dye Allura Red with bovine serum albumin, Food chem., 217, 52 (2017).

[36] N. Shahabadi, B. Bazvandi, A. Taherpour, Synthesis, structural determination and HSA interaction studies of a new water-soluble Cu (II) complex derived from 1, 10-phenanthroline and ranitidine drug, J. Coord. Chem., 70, 3186 (2017).

[37] N. Shahabadi, S. Fatahi, M. Maghsudi, Synthesis of a new Pt (II) complex containing valganciclovir drug and calf thymus DNA interaction study using multispectroscopic methods, J. Coord. Chem., 1 (2018).

[38] N. Shahabadi, M. Falsafi, M. Maghsudi, DNA-binding study of anticancer drug cytarabine by spectroscopic and molecular docking techniques, Nucleosides Nucleotides Nucleic Acids., 36, 49(2017).

[39] P. Jaividhya, M. Ganeshpandian, R. Dhivya, M.A. Akbarsha, M. Palaniandavar, Fluorescent mixed ligand copper (II) complexes of anthracene-appended Schiff bases: studies on DNA binding, nuclease activity and cytotoxicity, Dalton Trans., 44, 11997 (2015).

[40] C. Uvarani, K. Arumugasamy, K. Chandraprakash, M. Sankaran, A. Ata, P.S. Mohan, A New DNA‐Intercalative Cytotoxic Allylic Xanthone from Swertia corymbosa, Chem. Biodivers., 12, 358 (2015).

[41] F. Fathi, H. Mohammadzadeh-Aghdash, Y. Sohrabi, P. Dehghan, J.E.N. Dolatabadi, Kinetic and thermodynamic studies of bovine serum albumin interaction with ascorbyl palmitate and ascorbyl stearate food additives using surface plasmon resonance, Food chem., 246, 228 (2018).

[42] Q. Gan, Y. Qi, Y. Xiong, Y. Fu, X. Le, Two New Mononuclear Copper (II)-Dipeptide Complexes of 2-(2′-Pyridyl) Benzoxazole: DNA Interaction, Antioxidation and in Vitro Cytotoxicity Studies, J. Fluoresc., 27, 701 (2017).

[43] B. Sikarwar, V.V. Singh, P.K. Sharma, A. Kumar, D. Thavaselvam, M. Boopathi, B. Singh, Y.K. Jaiswal, DNA-probe-target interaction based detection of Brucella melitensis by using surface plasmon resonance, Biosens. Bioelectron., 87, 964 (2017).

[44] Q. Guo, Z. Zhang, Y. Song, S. Liu, W. Gao, H. Qiao, L. Guo, J. Wang, Investigation on interaction of DNA and several cationic surfactants with different head groups by spectroscopy, gel electrophoresis and viscosity technologies, Chemosphere, 168, 599 (2017).

[45] Z. Adiguzel, S. Ozalp‐Yaman, G. Celik, S. Salem, T. Bagci‐Onder, F. Senbabaoglu, Y. Cetin, C. Acilan, A platinum blue complex exerts its cytotoxic activity via DNA damage and induces apoptosis in cancer cells, Chem. Biol. Drug. Des., 90, 210 (2017).

[46] S. Pawar, R. Tandel, R. Kunabevu, J. Seetharamappa, Spectroscopic and computational approaches to unravel the mode of binding between a isoflavone, biochanin-A and calf thymus DNA, J. Biomol. Struct. Dyn., 1 (2018).

[47] N. Shakibapour, F. Dehghani Sani, S. Beigoli, H. Sadeghian, J. Chamani, Multi-spectroscopic and molecular modeling studies to reveal the interaction between propyl acridone and calf thymus DNA in the presence of histone H1: Binary and ternary approaches, J. Biomol. Struct. Dyn., 1 (2018).

[48] M. Dehkhodaei, M. Sahihi, H.A. Rudbari, F. Momenbeik, DNA and HSA interaction of Vanadium (IV), Copper (II), and Zinc (II) complexes derived from an asymmetric bidentate Schiff-base ligand: multi spectroscopic, viscosity measurements, molecular docking, and ONIOM studies, JBIC J. Biol. Inorg. Chem., 23, 181 (2018).

[49] M.S. Ali, M.A. Farah, H.A. Al-Lohedan, K.M. Al-Anazi, Comprehensive exploration of the anticancer activities of procaine and its binding with calf thymus DNA: a multi spectroscopic and molecular modelling study, RSC Adv., 8, 9083 (2018).

[50] E.M. Tuite, B. Nordén, Linear and circular dichroism characterization of thionine binding mode with DNA polynucleotides, Spectrochim. Acta Part A Acta A Mol. Biomol. Spectrosc. 189, 86 (2018).

[51] A.G. Clark, M.N. Naufer, F. Westerlund, P. Lincoln, I. Rouzina, T. Paramanathan, M.C. Williams, Reshaping the energy landscape transforms the mechanism and binding kinetics of DNA threading intercalation, Biochem., (2018).

[52] M. Bordbar, F. Tavoosi, A. Yeganeh-Faal, M.H. Zebarjadian, Interaction study of some macrocyclic inorganic schiff base complexes with calf thymus DNA using spectroscopic and voltammetric methods, J. Mol. Struct., 1152, 128 (2018).