Study of the ganciclovir resistant UL54 gene mutations in cytomegalovirus infected Kidney and Hematopoietic stem cell transplant recipients
Subject Areas : Virologyleila jalilsani 1 , رامین یعقوبی 2 , Bita Geramizadeh 3 , َAfsoon Afshari 4 , Mohammad hossein Karimi 5
1 - PhD student, Department of Microbiology, Shiraz Branch, Islamic Azad University, Shiraz, Iran.
2 - Professor, Transplant Research Center, Shiraz University of Medical Sciences, Shiraz, Iran.
3 - Professor, Transplant Research Center, Shiraz University of Medical Sciences, Shiraz, Iran
4 - Shiraz Nephro-Urology Research Center, Shiraz University of Medical Sciences, Shiraz, Iran
5 - Transplant Research Center, Shiraz University of Medical Sciences, Shiraz, Iran
Keywords: Kidney transplantation, Hematopoietic stem cell transplantation, Cytomegalovirus, Drug resistance,
Abstract :
Background & Objectives: Cytomegalovirus resistance to ganciclovir with specific mutations in the UL54 gene is a factor in treatment failure and disease progression in organ transplant recipients, particularly kidney and hematopoietic stem cell transplant recipients. This study aimed to determine the mutations leading to resistance in the UL54 gene of human cytomegalovirus.
Materials and Methods: In this study, after screening 23 kidney transplant and 2 hematopoietic stem cell transplant recipients with a positive initial CMV test, 6 patients were included in the final study based on the inclusion criteria (at least 2 available follow-ups with positive CMV Real-time PCR results). The UL54 gene was amplified using Nested-PCR, and the PCR products were then sequenced using the Sanger sequencing method. Finch software (version 1.4.0) was used to analyze the sequencing results.
Results: After reviewing the sequencing results, no known mutations were observed in 4 kidney transplant recipients. Also, a serine 882 insertion mutation in the UL54 gene was observed in 1 hematopoietic stem cell transplant recipient. Examination of the phylogenetic tree of the UL54 gene showed that the Iranian isolate ancestrally belongs to 20 reference strains, including the Merlin strain.
Conclusion: Given that the emergence of the serine 882 insertion mutation can weaken the potential for treatment and impair response to ganciclovir, it is very important to monitor the patients in question, determine the viral load, and assess their response or lack of response to treatment.
References:
1. Gugliesi, F., et al., Where do we stand after decades of studying human cytomegalovirus? Microorganisms, 2020. 8(5): p. 685.
2. Crough, T. and R. Khanna, Immunobiology of human cytomegalovirus: from bench to bedside. Clinical microbiology reviews, 2009. 22(1): p. 76-98.
3. Sohrabi, M., et al., Molecular analysis of ganciclovir-resistant cytomegalovirus in renal transplant recipients with high viral load. Archives of Iranian Medicine, 2016. 19(10): p. 700-703.
4. Cho, S.-Y., D.-G. Lee, and H.-J. Kim, Cytomegalovirus infections after hematopoietic stem cell transplantation: current status and future immunotherapy. International journal of molecular sciences, 2019. 20(11): p. 2666.
5. Afshari, A., et al., Association between interleukin-21, 23 and 27 expression and protein level with cytomegalovirus infection in liver transplant recipients. International Journal of Organ Transplantation Medicine, 2020. 11(1): p. 27.
6. Slobedman, B., et al., Latent cytomegalovirus down-regulates major histocompatibility complex class II expression on myeloid progenitors. Blood, The Journal of the American Society of Hematology, 2002. 100(8): p. 2867-2873.
7. Snydman, D., Infection in solid organ transplantation. Transplant infectious disease, 1999. 1(1): p. 21-28.
8. Afshari, A., R. Yaghobi, and M. Golshan, Cytomegalovirus microRNAs level determination in kidney recipients post transplantation. Virology journal, 2022. 19(1): p. 1-11.
9. Jakharia, N., D. Howard, and D.J. Riedel, CMV infection in hematopoietic stem cell transplantation: prevention and treatment strategies. Current treatment options in infectious diseases, 2021. 13: p. 123-140.
10. Panda, K., D. Parashar, and R. Viswanathan, An update on current antiviral strategies to combat human cytomegalovirus infection. Viruses, 2023. 15(6): p. 1358.
11. Sassine, J., et al., Refractory and resistant cytomegalovirus after hematopoietic cell transplant in the letermovir primary prophylaxis era. Clinical Infectious Diseases, 2021. 73(8): p. 1346-1354.
12. Teira, P., et al., Early cytomegalovirus reactivation remains associated with increased transplant-related mortality in the current era: a CIBMTR analysis. Blood, The Journal of the American Society of Hematology, 2016. 127(20): p. 2427-2438.
13. Jabs, D.A., et al., Cytomegalovirus retinitis and viral resistance: prevalence of resistance at diagnosis, 1994. Archives of ophthalmology, 1996. 114(7): p. 809-814.
14. Liu, J., et al., Patients with refractory cytomegalovirus (CMV) infection following allogeneic haematopoietic stem cell transplantation are at high risk for CMV disease and non-relapse mortality. Clinical Microbiology and Infection, 2015. 21(12): p. 1121. e9-1121. e15.
15. Fisher, C.E., et al., Risk factors and outcomes of ganciclovir-resistant cytomegalovirus infection in solid organ transplant recipients. Clinical Infectious Diseases, 2017. 65(1): p. 57-63.
16. Wellington, K., Valganciclovir: a review of its use in the management of CMV infection and disease in immunocompromised patients. Drugs, 2005. 65: p. 859-878.
17. Kanj, S.S., et al., Cytomegalovirus infection following liver transplantation: review of the literature. Clinical infectious diseases, 1996. 22(3): p. 537-549.
18. Baldanti, F., N. Lurain, and G. Gerna, Clinical and biologic aspects of human cytomegalovirus resistance to antiviral drugs. Human immunology, 2004. 65(5): p. 403-409.
19. Scott, G.M., et al., Multidrug resistance conferred by novel DNA polymerase mutations in human cytomegalovirus isolates. Antimicrobial agents and chemotherapy, 2007. 51(1): p. 89-94.
20. Shao, P.-L., et al., Lack of resistance-associated mutations in UL54 and UL97 genes of circulating Cytomegalovirus strains isolated in a medical center in Taiwan. Journal of the Formosan Medical Association, 2012. 111(8): p. 456-460.
21. El Chaer, F., D.P. Shah, and R.F. Chemaly, How I treat resistant cytomegalovirus infection in hematopoietic cell transplantation recipients. Blood, The Journal of the American Society of Hematology, 2016. 128(23): p. 2624-2636.
22. Heidari, M., et al., An Investigation of the Association Between Vascular Endothelial Growth Factor+ 405 G/C Polymorphism and Acute Liver Transplant Rejection in Iranian Liver Transplant Recipients. Experimental and Clinical Transplantation: Official Journal of the Middle East Society for Organ Transplantation, 2021.
23. Darai, M., et al., The Impact of HLA-G and HLA-E Polymorphisms on CMV Reinfection in Liver Transplant Recipients. Iranian Journal of Immunology, 2022. 19(4): p. 404-413.
24. Hassanzadeh, Y., et al., Increased Cytotoxic CD4+ T Cells with Reduced Cytotoxic Gene Profile Expression in Cytomegalovirus Reactivated Kidney Transplant Patients. Iranian Journal of Allergy, Asthma and Immunology, 2024: p. 1-13.
25. Jalilsani, L., et al., Detecting drug-resistant human cytomegalovirus mutations in liver transplant recipients: A study of the UL97 gene. Gene Reports, 2024. 36: p. 101962.
26. Jalilsani, L., et al., A New Duplication in 668 to 672 Sites of UL54 Gene in Cytomegalovirus Ganciclovir Resistant Liver Transplanted Patients. Jundishapur Journal of Microbiology, 2023. 16(9).
27. Yaghobi, R., et al., Significance of occult hepatitis C virus Infection in liver transplant patients with cryptogenic cirrhosis. Experimental and Clinical Transplantation: Official Journal of the Middle East Society for Organ Transplantation, 2018. 18(2): p. 206-209.
28. Keyvani, H., S.T. Saroukalaei, and A.H. Mohseni, Assessment of the human cytomegalovirus UL97 gene for identification of resistance to ganciclovir in iranian immunosuppressed patients. Jundishapur journal of microbiology, 2016. 9(5).
29. Recio, V., I. González, and D. Tarragó, Cytomegalovirus drug resistance mutations in transplant recipients with suspected resistance. Virology Journal, 2023. 20(1): p. 153.
30. Lurain, N.S. and S. Chou, Antiviral drug resistance of human cytomegalovirus. Clinical microbiology reviews, 2010. 23(4): p. 689-712.
31. Snydman, D.R., et al. Update and review: state-of-the-art management of cytomegalovirus infection and disease following thoracic organ transplantation. in Transplantation proceedings. 2011. Elsevier.
32. Chou, S., Cytomegalovirus UL97 mutations in the era of ganciclovir and maribavir. Reviews in medical virology, 2008. 18(4): p. 233-246.
33. Kim, S.J., et al., Cytomegalovirus resistance in CD 34+‐selected hematopoietic cell transplant recipients. Transplant Infectious Disease, 2018. 20(3): p. e12881.
34. Bienvenu, B., et al., Development of cytomegalovirus resistance to ganciclovir after oral maintenance treatment in a renal transplant recipient. Transplantation, 2000. 69(1): p. 182.
35. Hall Sedlak, R., et al., Rapid detection of human cytomegalovirus UL97 and UL54 mutations directly from patient samples. Journal of clinical microbiology, 2013. 51(7): p. 2354-2359.
36. Baldanti, F., et al., Single amino acid changes in the DNA polymerase confer foscarnet resistance and slow-growth phenotype, while mutations in the UL97-encoded phosphotransferase confer ganciclovir resistance in three double-resistant human cytomegalovirus strains recovered from patients with AIDS. Journal of virology, 1996. 70(3): p. 1390-1395.
37. Daikoku, T., et al., Rapid detection of human cytomegalovirus UL 97 and UL 54 mutations for antiviral resistance in clinical specimens. Microbiology and immunology, 2013. 57(5): p. 396-399.
38. Chou, S., et al., Improved detection of emerging drug-resistant mutant cytomegalovirus subpopulations by deep sequencing. Antimicrobial agents and chemotherapy, 2014. 58(8): p. 4697-4702.
39. Yang, S.-L., et al., Molecular Epidemiology of Cytomegalovirus UL97 and UL54 variants in Taiwan. Journal of Microbiology, Immunology and Infection, 2021. 54(5): p. 971-978.
40. Humar, A., et al., Cytomegalovirus (CMV) virus load kinetics to predict recurrent disease in solid-organ transplant patients with CMV disease. The Journal of infectious diseases, 2002. 186(6): p. 829-833.
41. van der Beek, M.T., et al., Preemptive versus sequential prophylactic-preemptive treatment regimens for cytomegalovirus in renal transplantation: comparison of treatment failure and antiviral resistance. Transplantation, 2010. 89(3): p. 320-326.
42. Hantz, S., et al., Drug-resistant cytomegalovirus in transplant recipients: a French cohort study. Journal of antimicrobial chemotherapy, 2010. 65(12): p. 2628-2640.
43. Boivin, G., et al., Analysis of cytomegalovirus DNA polymerase (UL54) mutations in solid organ transplant patients receiving valganciclovir or ganciclovir prophylaxis. Journal of medical virology, 2005. 77(3): p. 425-429.
44. Alwan, S.N., et al., Genotyping of cytomegalovirus from symptomatic infected neonates in Iraq. The American journal of tropical medicine and hygiene, 2019. 100(4): p. 957.
45. Moussawi, F.A., et al., The transcriptome of human mammary epithelial cells infected with the HCMV-DB strain displays oncogenic traits. Scientific Reports, 2018. 8(1): p. 12574.
46. Fang, F., et al., The polymorphism disparity of cytomegalovirus UL97 gene in pediatric patients, renal-transplanted, and hematopoietic stem cell transplanted recipients. Laboratory Medicine, 2010. 41(10): p. 601-606.